Structure Diversity Assessment of Native Chicken Population of North Gujarat by Hardy Weinberg Equilibrium Test and Bottleneck Analysis

Authors

  • Dhavalkumar F Chaudhary Department of Animal Genetics and Breeding, College of Veterinary Science & Animal Husbandry, Anand-388001, Kamdhenu University, Gujarat, India
  • Ankit Dave Department of Animal Genetics and Breeding, College of Veterinary Science & Animal Husbandry, Anand-388001, Kamdhenu University, Gujarat, India
  • Pooja Mankad Department of Animal Genetics and Breeding, College of Veterinary Science & Animal Husbandry, Anand-388001, Kamdhenu University, Gujarat, India
  • Dinesh Patel Department of Animal Genetics and Breeding, College of Veterinary Science & Animal Husbandry, Anand-388001, Kamdhenu University, Gujarat, India
  • Ashish C Patel Department of Animal Genetics and Breeding, College of Veterinary Science & Animal Husbandry, Anand-388001, Kamdhenu University, Gujarat, India
  • Rajesh S Joshi Department of Animal Genetics and Breeding, College of Veterinary Science & Animal Husbandry, Anand-388001, Kamdhenu University, Gujarat, India

DOI:

https://doi.org/10.48165/ijvsbt.19.4.14

Keywords:

Bottleneck analysis, Bottleneck analysis Genetic characterization, Native chicken of Gujarat

Abstract

Genetic characterization evaluates the population's genetic homogeneity, heterogeneity, inbreeding or introgression. The evolutionary history of a species or breed and/or population is revealed through the phylogenetic relationships between populations based on microsatellite analysis. Even the status of the breeds in the specified geographic area can be monitored to prioritize the breed’s conservation. Based on this a desi/native chicken population reared by tribal communities from North Gujarat were characterized by 25 microsatellite markers on 60 chicken blood samples. The microsatellites were amplified in seven multiplex panels using fluorescently labelled primers and genotyped on genetic analyzer system. In results, only five microsatellites were found to be in Hardy-Weinberg Equilibrium (HWE). Rest of the microsatellite loci deviated significantly (p<0.01) from HWE. The Bottleneck program test for departure from mutation-drift equilibrium based on heterozygosity deficit or excess revealed that this chicken population did not suffer from bottleneck in recent past.

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Published

2023-07-08

Issue

Vol. 19 No. 4 (2023): The Indian Journal of Veterinary Sciences and Biotechnology (IJVSBT) (Jul-Aug) 2023

Section

Articles

License

Creative Commons License

This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License.

How to Cite

Chaudhary, D.F., Dave, A., Mankad, P., Patel, D., Patel , A.C., & Joshi, R.S. (2023). Structure Diversity Assessment of Native Chicken Population of North Gujarat by Hardy Weinberg Equilibrium Test and Bottleneck Analysis. Indian Journal of Veterinary Sciences and Biotechnology, 19(4), 69–73. https://doi.org/10.48165/ijvsbt.19.4.14
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