An Efficient Method of Genomic DNA Extraction and Quantification from Insects

Authors

  • Dipti Kashyap Department of Zoology (Parasitology and Sericulture Laboratory) Babasaheb Bhimrao Ambedkar University (A Central University), Lucknow, U.P (India)
  • Kamal Jaiswal Department of Zoology (Parasitology and Sericulture Laboratory) Babasaheb Bhimrao Ambedkar University (A Central University), Lucknow, U.P (India)

DOI:

https://doi.org/10.48165/

Keywords:

Agarose gel electrophoresis, insects, optical density, quantity, quality

Abstract

The DNA extraction process is the most crucial  step for demonstrating various molecular  techniques such as PCR, DNA barcoding,  metagenomics etc. This paper describes a simple  and efficient protocol of DNA extraction from  insect’s sample that included Honey bees,  Carpenter bees and Flour beetle’s tissues with  slight modification in CTAB method. DNA  concentration together with purity has been  determined by spectrophotometer absorbance  reading at O.D260nm and O.D260/280nm  respectively. Additionally, lambda DNA marker  (NEB3012S) has been employed to validate band  intensity by agarose gel electrophoresis. The  DNA band exposed less smearing and intense  band in agarose gel. Band of DNA in HB and CB  lane was greater than 95.4ng but less than 95.4ng  in lane FB as compared to lambda DNA marker  bands. Also, DNA extracted from the tissue of  Honey bee (HB), Carpenter bee (CB) and Flour  Beetle (FB) measured by spectrophotometer for  analysing O.D at 260 nm was found to be 4.9, 5.1  and 3.7ug/ml and the purity by considering  260/280 O.D ratio was 2.33, 1.76, 1.92.  Absorbance ratio of 2.33 in DNA of Honey bees  (HB) sample indicated slight contamination of  protein or carbohydrate. Therefore, an achievable  approach has been made to extract high quality  of DNA by CTAB method and applying  spectrophotometer for Optical Density as well as  marker lambda DNA by agarose gel  electrophoresis for quantity and quality analysis. 

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References

Arakane Y., Muthukrishnan S., Beeman RW., Kanost, MR., Kramer KJ (2005). Laccase 2 is the phenoloxidase gene required for beetle cuticle tanning. Proc. Natl. Acad. Sci. USA 102:11337– 11342

Ball S.L. and Armstrong K.F (2008). Rapid, one-step DNA extraction for insect pest identification by using DNA barcodes. Journal of Economic Entomology, 101, 523-532. http://dx.doi.org/10.1093/jee/101.2.523

Calderon-Cortes N., Quesada M., Cano-Camacho H and Zavala-Páramo G (2010). A Simple and Rapid Method for DNA Isolation from Xylophagous Insects. Int. J. Mol. Sci. 11, 5056- 5064; doi: 10.3390/ijms11125056

Doyle J.J and Doyle J.L (1990). Isolation of plant DNA from fresh tissue. Focus, 12:13-15. 5. Doyle J.J and Doyle J.L (1987). A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem. Bull., 19:11-15.

Kyei-Poku G., Gautheir D and Frankenhuyzen K.V (2008). Molecular data and phylogeny of Nosema infecting lepidopteran forest defoliators in the Genera Choristoneura and Malacosoma J. Eukaryot. Microbiol., 55(1), 51–58.

Niu C., Kebede H., Auld D.L., Woodward J.E., Burow G., Robert J., Wright R.J (2008). A safe inexpensive method to isolate high quality plant and fungal DNA in an open laboratory environment. African Journal of Biotechnology. 7 (16), 2818-2822.

Sambrook J., Russell D.W (2001). Molecular Cloning: A Laboratory Manual. Cold Spring Harbor, NY, USA, Cold Spring Harbor Laboratory.

Singh R.P., Singh M, King R.R (1998) Use of citric acid for neutralizing polymerase chain reaction inhibition by chlorogenic acid in potato extracts. J Virol. Methods 74:231–235 10. Tiwari K.L., Jadhav S.K and Gupta S (2012). Modified CTAB technique for isolation of DNA from some medicinal plants. Res. J. Med. Plant, 6: 65-73.

Weiland J. J (1997). "Rapid procedure for the extraction of DNA from fungal spores and mycelia.," Fungal Genetics Reports: 44( 22). https://doi.org/10.4148/1941-4765.1290

Published

2020-05-15

How to Cite

An Efficient Method of Genomic DNA Extraction and Quantification from Insects . (2020). Bulletin of Pure & Applied Sciences- Zoology , 39(1), 88–93. https://doi.org/10.48165/